Construction of a core collection of eggplant (Solanum melongena L.) based on genome-wide SNP and SSR genotypes
Author:
Affiliation:
1. Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO)
2. Takii & Company, Limited
Publisher
Japanese Society of Breeding
Subject
Plant Science,Genetics,Agronomy and Crop Science
Link
https://www.jstage.jst.go.jp/article/jsbbs/69/3/69_18202/_pdf
Reference22 articles.
1. Cericola, F., E. Portis, L. Toppino, L. Barchi, N. Acciarri, T. Ciriaci, T. Sala, G.L. Rotino and S. Lanteri (2013) The population structure and diversity of eggplant from Asia and the Mediterranean Basin. PLoS ONE 8: e73702.
2. Chen, R., T. Hara, R. Ohsawa and Y. Yoshioka (2017) Analysis of genetic diversity of rapeseed genetic resources in Japan and core collection construction. Breed. Sci. 67: 239–247.
3. De Beukelaer, H., P. Smýkal, G.F. Davenport and V. Fack (2012) Core Hunter II: fast core subset selection based on multiple genetic diversity measures using Mixed Replica search. BMC Bioinformatics 13: 312.
4. Ebana, K., Y. Kojima, S. Fukuoka, T. Nagamine and M. Kawase (2008) Development of mini core collection of Japanese rice landrace. Breed. Sci. 58: 281–291.
5. Evanno, G., S. Regnaut and J. Goudet (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611–2620.
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