Mutational Paths with Sequence-Based Models of Proteins: From Sampling to Mean-Field Characterization
Author:
Funder
Agence Nationale de la Recherche
Publisher
American Physical Society (APS)
Subject
General Physics and Astronomy
Link
http://harvest.aps.org/v2/journals/articles/10.1103/PhysRevLett.130.158402/fulltext
Reference36 articles.
1. Directed evolution of enzyme catalysts
2. An evolution-based model for designing chorismate mutase enzymes
3. Generating functional protein variants with variational autoencoders
4. Exploring the sequence fitness landscape of a bridge between protein folds
5. The structure of genotype-phenotype maps makes fitness landscapes navigable
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1. Curvature-driven pathways interpolating between stationary points: the case of the pure spherical 3-spin model;Journal of Physics A: Mathematical and Theoretical;2024-01-31
2. Transition paths in Potts-like energy landscapes: General properties and application to protein sequence models;Physical Review E;2023-08-28
3. Mutational Paths with Sequence-Based Models of Proteins: From Sampling to Mean-Field Characterization;Physical Review Letters;2023-04-12
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