On the propensity of formation of cyclobutane dimers in face-to-face and face-to-back uracil stacks in solution-Reference-Cited by-同舟云学术

On the propensity of formation of cyclobutane dimers in face-to-face and face-to-back uracil stacks in solution

Published:2022 Issue:24 Volume:24 Page:14836-14845
ISSN:1463-9076
Container-title:Physical Chemistry Chemical Physics
language:en
Short-container-title:Phys. Chem. Chem. Phys.

Author:

Milovanović Branislav¹^ORCID,Novak Jurica²³⁴,Etinski Mihajlo¹^ORCID,Domcke Wolfgang⁵^ORCID,Došlić Nađa⁶^ORCID

Affiliation:

1. University of Belgrade, Faculty of Physical Chemistry, Belgrade, Serbia

2. Department of Biotechnology, University of Rijeka, HR-51000 Rijeka, Croatia

3. Scientific and Educational Center “Biomedical Technologies” School of Medical Biology, South Ural State University, RU-454080, Chelyabinsk, Russia

4. Center for Artificial Intelligence and Cybersecurity, University of Rijeka, 51000 Rijeka, Croatia

5. Department of Chemistry, Technical University of Munich, Garching, Germany

6. Department of Physical Chemistry, Ruđer Bošković Institute, Zagreb, Croatia

Abstract

Nonadiabatic molecular dynamics study of stacked uracil-water clusters using the ADC(2) method confirmed low tendency of forming RNA intra-strand cyclobutane dimers while opposite behavior is found for inter-stand mutual orientation of uracils.

Funder

Alexander von Humboldt-Stiftung

Hrvatska Zaklada za Znanost

Publisher

Royal Society of Chemistry (RSC)

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Link

http://pubs.rsc.org/en/content/articlepdf/2022/CP/D2CP00495J

Reference74 articles.

1. RNA under attack: Cellular handling of RNA damage

2. Effect of UV Radiation on Fluorescent RNA Aptamers’ Functional and Templating Ability

3. Cyclobutane pyrimidine dimers are predominant DNA lesions in whole human skin exposed to UVA radiation

4. Wavelength dependence of ultraviolet radiation‐induced DNA damage as determined by laser irradiation suggests that cyclobutane pyrimidine dimers are the principal DNA lesions produced by terrestrial sunlight

5. UV-induced damage to DNA: effect of cytosine methylation on pyrimidine dimerization

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