Accurate prediction of chemical shifts for aqueous protein structure on “Real World” data
Author:
Affiliation:
1. Pitzer Center for Theoretical Chemistry
2. University of California
3. Berkeley
4. USA
5. Department of Chemistry
6. Department of Bioengineering
Abstract
UCBShift predicts NMR chemical shifts of proteins that exceeds accuracy of other popular chemical shift predictors on real-world data sets.
Funder
National Institute of General Medical Sciences
U.S. Department of Energy
Publisher
Royal Society of Chemistry (RSC)
Subject
General Chemistry
Link
http://pubs.rsc.org/en/content/articlepdf/2020/SC/C9SC06561J
Reference60 articles.
1. Solution structure of the DNA-binding domain of the yeast transcriptional activator protein GCN4
2. Secondary-structure dependent chemical shifts in proteins
3. Relationship between nuclear magnetic resonance chemical shift and protein secondary structure
4. Empirical correlation between protein backbone conformation and C.alpha. and C.beta. 13C nuclear magnetic resonance chemical shifts
5. Protein chemical shift analysis: a practical guide
Cited by 32 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Streamlining NMR Chemical Shift Predictions for Intrinsically Disordered Proteins: Design of Ensembles with Dimensionality Reduction and Clustering;Journal of Chemical Information and Modeling;2024-08-05
2. EFG‐CS: Predicting chemical shifts from amino acid sequences with protein structure prediction using machine learning and deep learning models;Protein Science;2024-07-09
3. A Practical Guide to All-Atom and Coarse-Grained Molecular Dynamics Simulations Using Amber and Gromacs: A Case Study of Disulfide-Bond Impact on the Intrinsically Disordered Amyloid Beta;International Journal of Molecular Sciences;2024-06-18
4. Accurate Prediction of NMR Chemical Shifts: Integrating DFT Calculations with Three-Dimensional Graph Neural Networks;Journal of Chemical Theory and Computation;2024-06-06
5. The conformational landscape of fold-switcher KaiB is tuned to the circadian rhythm timescale;2024-06-03
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3