High-throughput generation, optimization and analysis of genome-scale metabolic models-Reference-Cited by-同舟云学术

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High-throughput generation, optimization and analysis of genome-scale metabolic models

Published:2010-08-29 Issue:9 Volume:28 Page:977-982
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Henry Christopher S,DeJongh Matthew,Best Aaron A,Frybarger Paul M,Linsay Ben,Stevens Rick L

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

http://www.nature.com/articles/nbt.1672.pdf

Reference39 articles.

1. Yus, E. et al. Impact of genome reduction on bacterial metabolism and its regulation. Science 326, 1263–1268 (2009).

2. Kumar, V.S. & Maranas, C.D. GrowMatch: an automated method for reconciling in silico/in vivo growth predictions. PLoS Comput. Biol. 5, e1000308 (2009).

3. Feist, A.M. & Palsson, B.O. The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli. Nat. Biotechnol. 26, 659–667 (2008).

4. Thiele, I. & Palsson, B. A protocol for generating a high-quality genome-scale metabolic reconstruction. Nat. Protoc. 5, 93–121 (2010).

5. Overbeek, R., Disz, T. & Stevens, R. The SEED: A peer-to-peer environment for genome annotation. Commun. ACM 47, 46–51 (2004).

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