A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing
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Published:2015-12
Issue:1
Volume:6
Page:
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ISSN:2041-1723
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Container-title:Nature Communications
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language:en
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Short-container-title:Nat Commun
Author:
Alioto Tyler S.ORCID, Buchhalter IvoORCID, Derdak Sophia, Hutter BarbaraORCID, Eldridge Matthew D., Hovig EivindORCID, Heisler Lawrence E., Beck Timothy A., Simpson Jared T., Tonon Laurie, Sertier Anne-Sophie, Patch Ann-MarieORCID, Jäger Natalie, Ginsbach Philip, Drews RubenORCID, Paramasivam Nagarajan, Kabbe Rolf, Chotewutmontri Sasithorn, Diessl Nicolle, Previti Christopher, Schmidt Sabine, Brors Benedikt, Feuerbach Lars, Heinold Michael, Gröbner Susanne, Korshunov Andrey, Tarpey Patrick S., Butler Adam P., Hinton Jonathan, Jones David, Menzies Andrew, Raine KeiranORCID, Shepherd Rebecca, Stebbings Lucy, Teague Jon W., Ribeca PaoloORCID, Giner Francesc CastroORCID, Beltran Sergi, Raineri Emanuele, Dabad Marc, Heath Simon C.ORCID, Gut Marta, Denroche Robert E.ORCID, Harding Nicholas J., Yamaguchi Takafumi N.ORCID, Fujimoto Akihiro, Nakagawa Hidewaki, Quesada Víctor, Valdés-Mas Rafael, Nakken Sigve, Vodák Daniel, Bower Lawrence, Lynch Andrew G., Anderson Charlotte L., Waddell Nicola, Pearson John V., Grimmond Sean M., Peto Myron, Spellman Paul, He Minghui, Kandoth Cyriac, Lee Semin, Zhang John, Létourneau Louis, Ma Singer, Seth SahilORCID, Torrents David, Xi Liu, Wheeler David A., López-Otín Carlos, Campo Elías, Campbell Peter J., Boutros Paul C.ORCID, Puente Xose S., Gerhard Daniela S., Pfister Stefan M., McPherson John D., Hudson Thomas J.ORCID, Schlesner Matthias, Lichter Peter, Eils Roland, Jones David T. W., Gut Ivo G.ORCID
Publisher
Springer Science and Business Media LLC
Subject
General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry
Reference40 articles.
1. Hudson, T. J. et al. International network of cancer genome projects. Nature 464, 993–998 (2010). 2. Mardis, E. R. & Wilson, R. K. Cancer genome sequencing: a review. Hum. Mol. Genet. 18, R163–R168 (2009). 3. Ley, T. J. et al. DNMT3A mutations in acute myeloid leukemia. N. Engl. J. Med. 363, 2424–2433 (2010). 4. Puente, X. S. et al. Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia. Nature 475, 101–105 (2011). 5. Alkodsi, A., Louhimo, R. & Hautaniemi, S. Comparative analysis of methods for identifying somatic copy number alterations from deep sequencing data. Brief Bioinform. 16, 242–254 (2014).
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