Characterization of microbial antifreeze protein with intermediate activity suggests that a bound-water network is essential for hyperactivity

Author:

Khan N. M.-Mofiz Uddin,Arai Tatsuya,Tsuda Sakae,Kondo Hidemasa

Abstract

AbstractAntifreeze proteins (AFPs) inhibit ice growth by adsorbing onto specific ice planes. Microbial AFPs show diverse antifreeze activity and ice plane specificity, while sharing a common molecular scaffold. To probe the molecular mechanisms responsible for AFP activity, we here characterized the antifreeze activity and crystal structure of TisAFP7 from the snow mold fungus Typhula ishikariensis. TisAFP7 exhibited intermediate activity, with the ability to bind the basal plane, compared with a hyperactive isoform TisAFP8 and a moderately active isoform TisAFP6. Analysis of the TisAFP7 crystal structure revealed a bound-water network arranged in a zigzag pattern on the surface of the protein’s ice-binding site (IBS). While the three AFP isoforms shared the water network pattern, the network on TisAFP7 IBS was not extensive, which was likely related to its intermediate activity. Analysis of the TisAFP7 crystal structure also revealed the presence of additional water molecules that form a ring-like network surrounding the hydrophobic side chain of a crucial IBS phenylalanine, which might be responsible for the increased adsorption of AFP molecule onto the basal plane. Based on these observations, we propose that the extended water network and hydrophobic hydration at IBS together determine the TisAFP activity.

Funder

Japan Society for the Promotion of Science

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

Reference66 articles.

1. Duman, J. G. & DeVries, A. L. Isolation characterization, and physical properties of protein antifreezes from the winter flounder, pseudopleuronectes americanus. Comp. Biochem. Physiol. 54B, 375–380 (1976).

2. Tomchaney, A. P., Morris, J. P., Kang, S. H. & Duman, J. G. Purification, composition, and physical properties of a thermal hysteresis “antifreeze” protein from larvae of the beetle, Tenebrio molitor. Biochemistry 21, 716–721 (1982).

3. Urrutia, M. E., Duman, J. G. & Knight, C. A. Plant thermal hysteresis proteins. Biochem. Biophys. Acta. 1121, 199–206 (1992).

4. Duman, J. G. & Olsen, T. M. Thermal hysteresis protein activity in bacteria, fungi, and phylogenetically diverse plants. Cryobiology 30, 322–328 (1993).

5. DeLuca, C. I. & Davies, P. L. Antifreeze proteins bind independently to ice. Biophys. J. 74, 1502–1508 (1998).

Cited by 14 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3