Experimental–theoretical study of laccase as a detoxifier of aflatoxins

Author:

Zaccaria Marco,Dawson William,Russel Kish Darius,Reverberi Massimo,Bonaccorsi di Patti Maria Carmela,Domin Marek,Cristiglio Viviana,Chan Bun,Dellafiora Luca,Gabel Frank,Nakajima Takahito,Genovese Luigi,Momeni Babak

Abstract

AbstractWe investigate laccase-mediated detoxification of aflatoxins, fungal carcinogenic food contaminants. Our experimental comparison between two aflatoxins with similar structures (AFB1and AFG2) shows significant differences in laccase-mediated detoxification. A multi-scale modeling approach (Docking, Molecular Dynamics, and Density Functional Theory) identifies the highly substrate-specific changes required to improve laccase detoxifying performance. We employ a large-scale density functional theory-based approach, involving more than 7000 atoms, to identify the amino acid residues that determine the affinity of laccase for aflatoxins. From this study we conclude: (1) AFB1is more challenging to degrade, to the point of complete degradation stalling; (2) AFG2is easier to degrade by laccase due to its lack of side products and favorable binding dynamics; and (3) ample opportunities to optimize laccase for aflatoxin degradation exist, especially via mutations leading to π–π stacking. This study identifies a way to optimize laccase for aflatoxin bioremediation and, more generally, contributes to the research efforts aimed at rational enzyme optimization.

Funder

Boston College

Office of the Vice Provost for Research, Boston College

Richard and Susan Smith Family Foundation

Directorate for Engineering

Ministry of Education, Culture, Sports, Science and Technology

Bio-oriented Technology Research Advancement Institution

MaX European Centre of Excellence

Centre National de la Recherche Scientifique

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

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