Dictionary learning for integrative, multimodal and scalable single-cell analysis-Reference-Cited by-同舟云学术

Dictionary learning for integrative, multimodal and scalable single-cell analysis

Published:2023-05-25 Issue: Volume: Page:
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Hao Yuhan,Stuart Tim^ORCID,Kowalski Madeline H.,Choudhary Saket^ORCID,Hoffman Paul^ORCID,Hartman Austin,Srivastava Avi,Molla Gesmira,Madad Shaista,Fernandez-Granda Carlos,Satija Rahul^ORCID

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

https://www.nature.com/articles/s41587-023-01767-y.pdf

Reference121 articles.

1. Kent, W. J. BLAT—the BLAST-like alignment tool. Genome Res. 12, 656–664 (2002).

2. Langmead, B., Trapnell, C., Pop, M. & Salzberg, S. L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25 (2009).

3. Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics 25, 1754–1760 (2009).

4. Hao, Y. et al. Integrated analysis of multimodal single-cell data. Cell 184, 3573–3587 (2021).

5. Kang, J. B. et al. Efficient and precise single-cell reference atlas mapping with Symphony. Nat. Commun. 12, 5890 (2021).

Cited by 475 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Resilience of the replacing dentition in adult reptiles;Developmental Biology;2024-12

2. Applications for single-cell and spatial transcriptomics in plant research;New Crops;2024-12

3. Transcriptomic profiling identifies a nucleotide metabolism-related signature with prognostic power in gliomas;Translational Oncology;2024-11

4. Matricellular protein CCN1 promotes collagen alignment and scar integrity after myocardial infarction;Matrix Biology;2024-11

5. Acute ocular hypertension in the living human eye: Model description and initial cellular responses to elevated intraocular pressure;Vision Research;2024-10