Automated assembly of centromeres from ultra-long error-prone reads
Author:
Publisher
Springer Science and Business Media LLC
Subject
Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology
Link
http://www.nature.com/articles/s41587-020-0582-4.pdf
Reference46 articles.
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3. Kolmogorov, M., Yuan, J., Lin, Y. & Pevzner, P. A. Assembly of long, error-prone reads using repeat graphs. Nat. Biotechnol. 37, 540–546 (2019).
4. Kamath, G. M., Shomorony, I., Xia, F., Courtade, T. A. & Tse, D. N. HINGE: long-read assembly achieves optimal repeat resolution. Genome Res. 27, 747–756 (2017).
5. Koren, S. et al. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. Genome Res. 27, 722–736 (2017).
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