An exact arithmetic toolbox for a consistent and reproducible structural analysis of metabolic network models-Reference-Cited by-同舟云学术

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An exact arithmetic toolbox for a consistent and reproducible structural analysis of metabolic network models

Published:2014-10-07 Issue:1 Volume:5 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Chindelevitch Leonid,Trigg Jason,Regev Aviv,Berger Bonnie

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

http://www.nature.com/articles/ncomms5893.pdf

Reference46 articles.

1. Varma, A. & Palsson, B. Metabolic flux balancing: basic concepts, scientific and practical use. Nat. Biotechnol. 12, 994–998 (1994).

2. Covert, M. et al. Metabolic modeling of microbial strains in silico. Trends Biochem. Sci. 26, 179–186 (2001).

3. Price, N., Papin, J., Schilling, C. & Palsson, B. Genome-scale microbial in silico models: the constraints-based approach. Trends Biotechnol. 21, 162–169 (2003).

4. Price, N., Reed, J. & Palsson, B. Genome-scale models of microbial cells: evaluating the consequences of constraints. Nat. Rev. Microbiol. 2, 886–897 (2004).

5. Varma, A. & Palsson, B. Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. Appl. Environ. Microbiol. 60, 3724–3731 (1994).

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