Benchmarking spatial clustering methods with spatially resolved transcriptomics data
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Publisher
Springer Science and Business Media LLC
Link
https://www.nature.com/articles/s41592-024-02215-8.pdf
Reference89 articles.
1. Vandereyken, K., Sifrim, A., Thienpont, B. & Voet, T. Methods and applications for single-cell and spatial multi-omics. Nat. Rev. Genet. https://doi.org/10.1038/s41576-023-00580-2 (2023).
2. Seferbekova, Z., Lomakin, A., Yates, L. R. & Gerstung, M. Spatial biology of cancer evolution. Nat. Rev. Genet. https://doi.org/10.1038/s41576-022-00553-x (2022).
3. Moffitt, J. R., Lundberg, E. & Heyn, H. The emerging landscape of spatial profiling technologies. Nat. Rev. Genet. https://doi.org/10.1038/s41576-022-00515-3 (2022).
4. Zeng, H. et al. Spatially resolved single-cell translatomics at molecular resolution. Science 380, eadd3067 (2023).
5. Shi, H. et al. Spatial atlas of the mouse central nervous system at molecular resolution. Nature https://doi.org/10.1038/s41586-023-06569-5 (2023).
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