A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline-Reference-Cited by-同舟云学术

A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline

Published:2016-02-25 Issue:3 Volume:15 Page:1023-1032
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Rudnick Paul A.¹²,Markey Sanford P.²,Roth Jeri²,Mirokhin Yuri²,Yan Xinjian²,Tchekhovskoi Dmitrii V.²,Edwards Nathan J.³,Thangudu Ratna R.⁴,Ketchum Karen A.⁴,Kinsinger Christopher R.⁵,Mesri Mehdi⁵,Rodriguez Henry⁵,Stein Stephen E.²

Affiliation:

1. Spectragen Informatics, Bainbridge Island, Washington 98110, United States

2. Biomolecular Measurement Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, United States

3. Department of Biochemistry and Molecular & Cellular Biology, Georgetown University Medical Center, Washington, D.C. 20007, United States

4. ESAC, Inc., Rockville, Maryland 20850, United States

5. Office of Cancer Clinical Proteomics Research, National Cancer Institute, Bethesda, Maryland 20892, United States

Funder

National Cancer Institute

National Institutes of Health

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.5b01091

Reference17 articles.

1. Proteogenomic characterization of human colon and rectal cancer

2. The CPTAC Data Portal: A Resource for Cancer Proteomics Research

3. Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

4. A uniform proteomics MS/MS analysis platform utilizing open XML file formats

5. A cross-platform toolkit for mass spectrometry and proteomics

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