Improving Peptide-Level Mass Spectrometry Analysis via Double Competition-Reference-Cited by-同舟云学术

Improving Peptide-Level Mass Spectrometry Analysis via Double Competition

Published:2022-09-27 Issue:10 Volume:21 Page:2412-2420
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Lin Andy¹^ORCID,Short Temana²,Noble William Stafford³⁴^ORCID,Keich Uri²^ORCID

Affiliation:

1. Chemical and Biological Signatures, Pacific Northwest National Laboratory, Seattle, Washington 98109, United States

2. School of Mathematics & Statistics, University of Sydney, New South Wales, 2006, Australia

3. Department of Genome Sciences, University of Washington, Seattle, Washington 98195, United States

4. Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, Washington 98195, United States

Funder

Laboratory Directed Research and Development

National Institute of General Medical Sciences

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.2c00282

Reference36 articles.

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2. He, K.; Fu, Y.; Zeng, W.F.; Luo, L.; Chi, H.; Liu, C.; Qing, L.Y.; Sun, R.X.; He, S.M. A Theoretical Foundation of the Target-Decoy Search Strategy for False Discovery Rate Control in Proteomics. arXiv, 2015. arXiv:1501.00537[stat.AP].

3. Controlling the false discovery rate via knockoffs

4. False discovery rates in spectral identification

5. Systematic Comparison of False-Discovery-Rate-Controlling Strategies for Proteogenomic Search Using Spike-in Experiments

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