HyperSpec: Ultrafast Mass Spectra Clustering in Hyperdimensional Space-Reference-Cited by-同舟云学术

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HyperSpec: Ultrafast Mass Spectra Clustering in Hyperdimensional Space

Published:2023-05-11 Issue:6 Volume:22 Page:1639-1648
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Xu Weihong¹^ORCID,Kang Jaeyoung²,Bittremieux Wout³^ORCID,Moshiri Niema¹^ORCID,Rosing Tajana¹

Affiliation:

1. Department of Computer Science Engineering, University of California, San Diego, La Jolla, California 92093, United States

2. Department of Electrical and Computer Engineering, University of California, San Diego, La Jolla, California 92093, United States

3. Department of Computer Science, University of Antwerp, 2020 Antwerpen, Belgium

Funder

Division of Computing and Communication Foundations

Defense Advanced Research Projects Agency

Semiconductor Research Corporation

Division of Advanced Cyberinfrastructure

Division of Computer and Network Systems

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.2c00612

Reference40 articles.

1. A draft map of the human proteome

2. A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides

3. A Quantitative Spatial Proteomics Analysis of Proteome Turnover in Human Cells

4. msCRUSH: Fast Tandem Mass Spectral Clustering Using Locality Sensitive Hashing

5. Clustering Millions of Tandem Mass Spectra

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. HyperGen: compact and efficient genome sketching using hyperdimensional vectors;Bioinformatics;2024-07-01

2. SpecHD: Hyperdimensional Computing Framework for FPGA-Based Mass Spectrometry Clustering;2024 Design, Automation & Test in Europe Conference & Exhibition (DATE);2024-03-25

3. HyperGen: Compact and Efficient Genome Sketching using Hyperdimensional Vectors;2024-03-08

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