MASPIC: Intensity-Based Tandem Mass Spectrometry Scoring Scheme That Improves Peptide Identification at High Confidence-Reference-Cited by-同舟云学术

MASPIC: Intensity-Based Tandem Mass Spectrometry Scoring Scheme That Improves Peptide Identification at High Confidence

Published:2005-10-22 Issue:23 Volume:77 Page:7581-7593
ISSN:0003-2700
Container-title:Analytical Chemistry
language:en
Short-container-title:Anal. Chem.

Author:

Narasimhan Chandrasegaran¹,Tabb David L.¹,VerBerkmoes Nathan C.¹,Thompson Melissa R.¹,Hettich Robert L.¹,Uberbacher Edward C.¹

Affiliation:

1. Graduate School of Genome Science and Technology, University of TennesseeOak Ridge National Laboratory, 1060 Commerce Park, Oak Ridge, Tennessee 37830-8026, and Organic and Biological Mass Spectrometry, Chemical Sciences Division, and Genome Analysis and Systems Modeling, Life Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831-6131

Publisher

American Chemical Society (ACS)

Subject

Analytical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/ac0501745

Reference43 articles.

1. Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

2. The abc's (and xyz's) of peptide sequencing

3. Biomedical informatics for proteomics

4. Evaluation of Multidimensional Chromatography Coupled with Tandem Mass Spectrometry (LC/LC−MS/MS) for Large-Scale Protein Analysis: The Yeast Proteome

Cited by 44 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Rescoring Peptide Spectrum Matches: Boosting Proteomics Performance by Integrating Peptide Property Predictors Into Peptide Identification;Molecular & Cellular Proteomics;2024-07

2. Prediction of peptide mass spectral libraries with machine learning;Nature Biotechnology;2022-08-25

3. Spectral Prediction Features as a Solution for the Search Space Size Problem in Proteogenomics;Molecular & Cellular Proteomics;2021

4. QCMS2 as a new method for providing insight into peptide fragmentation: The influence of the side-chain and inter-side-chain interactions;Journal of Mass Spectrometry;2019-11-19

5. PROTEOFORMER 2.0: Further Developments in the Ribosome Profiling-assisted Proteogenomic Hunt for New Proteoforms;Molecular & Cellular Proteomics;2019-08