Phylogenetic conservation of soil bacterial responses to simulated global changes

Author:

Isobe Kazuo1,Bouskill Nicholas J.2,Brodie Eoin L.23,Sudderth Erika A.4,Martiny Jennifer B. H.5ORCID

Affiliation:

1. Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan

2. Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA

3. Department of Environmental Science, Policy and Management, University of California, Berkeley, CA, USA

4. Center for Environmental Studies, Brown University, Providence, RI, USA

5. Department of Ecology and Evolutionary Biology, University of California, Irvine, CA, USA

Abstract

Soil bacterial communities are altered by anthropogenic drivers such as climate change-related warming and fertilization. However, we lack a predictive understanding of how bacterial communities respond to such global changes. Here, we tested whether phylogenetic information might be more predictive of the response of bacterial taxa to some forms of global change than others. We analysed the composition of soil bacterial communities from perturbation experiments that simulated warming, drought, elevated CO 2 concentration and phosphorus (P) addition. Bacterial responses were phylogenetically conserved to all perturbations. The phylogenetic depth of these responses varied minimally among the types of perturbations and was similar when merging data across locations, implying that the context of particular locations did not affect the phylogenetic pattern of response. We further identified taxonomic groups that responded consistently to each type of perturbation. These patterns revealed that, at the level of family and above, most groups responded consistently to only one or two types of perturbations, suggesting that traits with different patterns of phylogenetic conservation underlie the responses to different perturbations. We conclude that a phylogenetic approach may be useful in predicting how soil bacterial communities respond to a variety of global changes. This article is part of the theme issue ‘Conceptual challenges in microbial community ecology’.

Publisher

The Royal Society

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology

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