A novel approach to the functional classification of retinal ganglion cells

Author:

Hilgen Gerrit12ORCID,Kartsaki Evgenia13,Kartysh Viktoriia145,Cessac Bruno3,Sernagor Evelyne1

Affiliation:

1. Biosciences Institute, Newcastle University, Newcastle upon Tyne NE2 4HH, UK

2. Health and Life Sciences, Applied Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, UK

3. Université Côte d'Azur, Inria, Biovision team and Neuromod Institute, 06902 Sophia Antipolis Cedex, France

4. Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases (LBI-RUD), 1090 Vienna, Austria

5. Research Centre for Molecular Medicine (CeMM) of the Austrian Academy of Sciences, 1090 Vienna, Austria

Abstract

Retinal neurons are remarkedly diverse based on structure, function and genetic identity. Classifying these cells is a challenging task, requiring multimodal methodology. Here, we introduce a novel approach for retinal ganglion cell (RGC) classification, based on pharmacogenetics combined with immunohistochemistry and large-scale retinal electrophysiology. Our novel strategy allows grouping of cells sharing gene expression and understanding how these cell classes respond to basic and complex visual scenes. Our approach consists of several consecutive steps. First, the spike firing frequency is increased in RGCs co-expressing a certain gene ( Scnn1a or Grik4 ) using excitatory DREADDs (designer receptors exclusively activated by designer drugs) in order to single out activity originating specifically from these cells. Their spike location is then combined with post hoc immunostaining, to unequivocally characterize their anatomical and functional features. We grouped these isolated RGCs into multiple clusters based on spike train similarities. Using this novel approach, we were able to extend the pre-existing list of Grik4-expressing RGC types to a total of eight and, for the first time, we provide a phenotypical description of 13 Scnn1a-expressing RGCs. The insights and methods gained here can guide not only RGC classification but neuronal classification challenges in other brain regions as well.

Funder

Leverhulme Trust

Newcastle University PVC Discretionary Fund

Newcastle University Graduate School

Publisher

The Royal Society

Subject

General Biochemistry, Genetics and Molecular Biology,Immunology,General Neuroscience

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