Information theory-based direct causality measure to assess cardiac fibrillation dynamics

Author:

Shi Xili1ORCID,Sau Arunashis12,Li Xinyang1,Patel Kiran12,Bajaj Nikesh1,Varela Marta1,Wu Huiyi1,Handa Balvinder12,Arnold Ahran12,Shun-Shin Matthew12,Keene Daniel12,Howard James12,Whinnett Zachary12,Peters Nicholas12,Christensen Kim34,Jensen Henrik Jeldtoft546ORCID,Ng Fu Siong127ORCID

Affiliation:

1. National Heart and Lung Institute, Imperial College London, London, UK

2. Department of Cardiology, Imperial College Healthcare NHS Trust, London, UK

3. Department of Physics, Imperial College London, London, UK

4. Centre for Complexity Science, Imperial College London, London, UK

5. Department of Mathematics, Imperial College London, London, UK

6. Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Japan

7. Department of Cardiology, Chelsea and Westminster NHS Foundation Trust, London, UK

Abstract

Understanding the mechanism sustaining cardiac fibrillation can facilitate the personalization of treatment. Granger causality analysis can be used to determine the existence of a hierarchical fibrillation mechanism that is more amenable to ablation treatment in cardiac time-series data. Conventional Granger causality based on linear predictability may fail if the assumption is not met or given sparsely sampled, high-dimensional data. More recently developed information theory-based causality measures could potentially provide a more accurate estimate of the nonlinear coupling. However, despite their successful application to linear and nonlinear physical systems, their use is not known in the clinical field. Partial mutual information from mixed embedding (PMIME) was implemented to identify the direct coupling of cardiac electrophysiology signals. We show that PMIME requires less data and is more robust to extrinsic confounding factors. The algorithms were then extended for efficient characterization of fibrillation organization and hierarchy using clinical high-dimensional data. We show that PMIME network measures correlate well with the spatio-temporal organization of fibrillation and demonstrated that hierarchical type of fibrillation and drivers could be identified in a subset of ventricular fibrillation patients, such that regions of high hierarchy are associated with high dominant frequency.

Funder

British Heart Foundation

National Institute for Health Research (NIHR) Imperial Biomedical Research Centre

BHF Centre for Research Excellence

British Heart Foundation (BHF) clinical research training fellowship

Publisher

The Royal Society

Subject

Biomedical Engineering,Biochemistry,Biomaterials,Bioengineering,Biophysics,Biotechnology

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