Characteristic features of statistical models and machine learning methods derived from pest and disease monitoring datasets

Author:

Kishi Shigeki1ORCID,Sun Jianqiang1ORCID,Kawaguchi Akira12,Ochi Sunao13,Yoshida Megumi13,Yamanaka Takehiko1

Affiliation:

1. Research Center for Agricultural Information and Technology, National Agriculture and Food Research Organization 105-0003, 2-14-1 Kowa Nishi-Shimbashi Building, Nishi-Shimbashi, Minato, Tokyo, Japan

2. Western Region Agricultural Research Center (Kinki, Chugoku and Shikoku Regions), National Agriculture and Food Research Organization 721-0975, 6-12-1 Nishi-Fukatsu, Fukuyama, Hiroshima, Japan

3. Institute for Plant Protection, National Agriculture and Food Research Organization 305-8666, 2-1-18 Kannon-dai, Tsukuba, Ibaraki, Japan

Abstract

While many studies have used traditional statistical methods when analysing monitoring data to predict future population dynamics of crop pests and diseases, increasing studies have used machine learning methods. The characteristic features of these methods have not been fully elucidated and arranged. We compared the prediction performance between two statistical and seven machine learning methods using 203 monitoring datasets recorded over several decades on four major crops in Japan and meteorological and geographical information as the explanatory variables. The decision tree and random forest of machine learning were found to be most efficient, while regression models of statistical and machine learning methods were relatively inferior. The best two methods were better for biased and scarce data, while the statistical Bayesian model was better for larger dataset sizes. Therefore, researchers should consider data characteristics when selecting the most appropriate method.

Funder

a research project for technologies to strengthen the international competitiveness of Japan's agriculture and food industry

the Environment Research and Technology Development Fund

Publisher

The Royal Society

Subject

Multidisciplinary

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