Efficient Synergistic Single-Cell Genome Assembly-Reference-Cited by-同舟云学术

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Efficient Synergistic Single-Cell Genome Assembly

Published:2016-05-23 Issue: Volume:4 Page:
ISSN:2296-4185
Container-title:Frontiers in Bioengineering and Biotechnology
language:
Short-container-title:Front. Bioeng. Biotechnol.

Author:

Movahedi Narjes S.,Embree Mallory,Nagarajan Harish,Zengler Karsten,Chitsaz Hamidreza

Funder

National Science Foundation

Publisher

Frontiers Media SA

Subject

Biomedical Engineering,Histology,Bioengineering,Biotechnology

Reference43 articles.

1. The RAST server: rapid annotations using subsystems technology;Aziz;BMC Genomics,2008

2. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

3. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms;Caporaso;ISME J.,2012

4. Efficient de novo assembly of single-cell bacterial genomes from short-read data sets;Chitsaz;Nat. Biotechnol.,2011

5. How to apply de Bruijn graphs to genome assembly;Compeau;Nat. Biotechnol.,2011

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Graph Traversal Edit Distance and Extensions;Journal of Computational Biology;2020-03-01

2. Clinical Applications of and Challenges in Single-Cell Analysis of Circulating Tumor Cells;DNA and Cell Biology;2018-02

3. GTED: Graph Traversal Edit Distance;Lecture Notes in Computer Science;2018

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