Efficient de novo assembly of single-cell bacterial genomes from short-read data sets-Reference-Cited by-同舟云学术

Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

Published:2011-09-18 Issue:10 Volume:29 Page:915-921
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Chitsaz Hamidreza,Yee-Greenbaum Joyclyn L,Tesler Glenn,Lombardo Mary-Jane,Dupont Christopher L,Badger Jonathan H,Novotny Mark,Rusch Douglas B,Fraser Louise J,Gormley Niall A,Schulz-Trieglaff Ole,Smith Geoffrey P,Evers Dirk J,Pevzner Pavel A,Lasken Roger S

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

http://www.nature.com/articles/nbt.1966.pdf

Reference47 articles.

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3. Raghunathan, A. et al. Genomic DNA amplification from a single bacterium. Appl. Environ. Microbiol. 71, 3342–3347 (2005).

4. Dean, F.B. et al. Comprehensive human genome amplification using multiple displacement amplification. Proc. Natl. Acad. Sci. USA 99, 5261–5266 (2002).

5. Dean, F.B., Nelson, J.R., Giesler, T.L. & Lasken, R.S. Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification. Genome Res. 11, 1095–1099 (2001).

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