Current Affairs of Microbial Genome-Wide Association Studies: Approaches, Bottlenecks and Analytical Pitfalls-Reference-Cited by-同舟云学术

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Current Affairs of Microbial Genome-Wide Association Studies: Approaches, Bottlenecks and Analytical Pitfalls

Published:2020-01-30 Issue: Volume:10 Page:
ISSN:1664-302X
Container-title:Frontiers in Microbiology
language:
Short-container-title:Front. Microbiol.

Author:

San James Emmanuel,Baichoo Shakuntala,Kanzi Aquillah,Moosa Yumna,Lessells Richard,Fonseca Vagner,Mogaka John,Power Robert,de Oliveira Tulio

Funder

National Human Genome Research Institute

Publisher

Frontiers Media SA

Subject

Microbiology (medical),Microbiology

Reference105 articles.

1. Population structure of pathogenic bacteria revisited.;Achtman;Int. J. Med. Microbiol.,2004

2. The cost of dichotomising continuous variables.;Altman;BMJ,2006

3. Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus.;Ansari;Nat. Genet.,2017

4. A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria.;Aun;PLoS Comput. Biol.,2018

5. A genome-to-genome analysis of associations between human genetic variation. HIV-1 sequence diversity, and viral control.;Bartha;eLife,2013

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1. Holistic understanding of trimethoprim resistance in Streptococcus pneumoniae using an integrative approach of genome-wide association study, resistance reconstruction, and machine learning;mBio;2024-09-11

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3. Comparative genomic analysis identifies potential adaptive variation in Mycoplasma ovipneumoniae;Microbial Genomics;2024-08-30

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5. Clinical and in vitro models identify distinct adaptations enhancing Staphylococcus aureus pathogenesis in human macrophages;PLOS Pathogens;2024-07-11

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