Metagenomics-Based, Strain-Level Analysis of Escherichia coli From a Time-Series of Microbiome Samples From a Crohn's Disease Patient-Reference-Cited by-同舟云学术

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Metagenomics-Based, Strain-Level Analysis of Escherichia coli From a Time-Series of Microbiome Samples From a Crohn's Disease Patient

Published:2018-10-30 Issue: Volume:9 Page:
ISSN:1664-302X
Container-title:Frontiers in Microbiology
language:
Short-container-title:Front. Microbiol.

Author:

Fang Xin,Monk Jonathan M.,Nurk Sergey,Akseshina Margarita,Zhu Qiyun,Gemmell Christopher,Gianetto-Hill Connor,Leung Nelly,Szubin Richard,Sanders Jon,Beck Paul L.,Li Weizhong,Sandborn William J.,Gray-Owen Scott D.,Knight Rob,Allen-Vercoe Emma,Palsson Bernhard O.,Smarr Larry

Funder

Foundation for the National Institutes of Health

Novo Nordisk Fonden

University of California, San Diego

Publisher

Frontiers Media SA

Subject

Microbiology (medical),Microbiology

Reference83 articles.

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2. Intestinal inflammation targets cancer-inducing activity of the microbiota;Arthur;Science,2012

3. The RAST server: rapid annotations using subsystems technology;Aziz;BMC Genomics,2008

4. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

5. CEACAM6 acts as a receptor for adherent-invasive E. coli, supporting ileal mucosa colonization in crohn disease;Barnich;J. Clin. Invest.,2007

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