Phenotyping Diabetes Mellitus on Aggregated Electronic Health Records from Disparate Health Systems

Author:

Tan Hui Xing1,Lim Rachel Li Ting1,Ang Pei San1ORCID,Foo Belinda Pei Qin1,Koon Yen Ling1,Neo Jing Wei1,Ng Amelia Jing Jing1ORCID,Tan Siew Har1,Teo Desmond Chun Hwee1,Tham Mun Yee1,Yap Aaron Jun Yi1ORCID,Ng Nicholas Kai Ming1,Loke Celine Wei Ping1,Peck Li Fung1,Huang Huilin1,Dorajoo Sreemanee Raaj1

Affiliation:

1. Vigilance & Compliance Branch, Health Products Regulation Group, Health Sciences Authority, Singapore 138667, Singapore

Abstract

Background: Identifying patients with diabetes mellitus (DM) is often performed in epidemiological studies using electronic health records (EHR), but currently available algorithms have features that limit their generalizability. Methods: We developed a rule-based algorithm to determine DM status using the nationally aggregated EHR database. The algorithm was validated on two chart-reviewed samples (n = 2813) of (a) patients with atrial fibrillation (AF, n = 1194) and (b) randomly sampled hospitalized patients (n = 1619). Results: DM diagnosis codes alone resulted in a sensitivity of 77.0% and 83.4% in the AF and random hospitalized samples, respectively. The proposed algorithm combines blood glucose values and DM medication usage with diagnostic codes and exhibits sensitivities between 96.9% and 98.0%, while positive predictive values (PPV) ranged between 61.1% and 75.6%. Performances were comparable across sexes, but a lower specificity was observed in younger patients (below 65 versus 65 and above) in both validation samples (75.8% vs. 90.8% and 60.6% vs. 88.8%). The algorithm was robust for missing laboratory data but not for missing medication data. Conclusions: In this nationwide EHR database analysis, an algorithm for identifying patients with DM has been developed and validated. The algorithm supports quantitative bias analyses in future studies involving EHR-based DM studies.

Publisher

MDPI AG

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