Computational Chemistry for the Identification of Lead Compounds for Radiotracer Development

Author:

Hsieh Chia-Ju1ORCID,Giannakoulias Sam2,Petersson E. James2,Mach Robert H.1ORCID

Affiliation:

1. Division of Nuclear Medicine and Clinical Molecular Imaging, Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA

2. Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104, USA

Abstract

The use of computer-aided drug design (CADD) for the identification of lead compounds in radiotracer development is steadily increasing. Traditional CADD methods, such as structure-based and ligand-based virtual screening and optimization, have been successfully utilized in many drug discovery programs and are highlighted throughout this review. First, we discuss the use of virtual screening for hit identification at the beginning of drug discovery programs. This is followed by an analysis of how the hits derived from virtual screening can be filtered and culled to highly probable candidates to test in in vitro assays. We then illustrate how CADD can be used to optimize the potency of experimentally validated hit compounds from virtual screening for use in positron emission tomography (PET). Finally, we conclude with a survey of the newest techniques in CADD employing machine learning (ML).

Funder

National Institute of Neurological Disorders and Stroke

National Science Foundation

Publisher

MDPI AG

Subject

Drug Discovery,Pharmaceutical Science,Molecular Medicine

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