Data Science and Plant Metabolomics

Author:

Kisiel Anna12ORCID,Krzemińska Adrianna2,Cembrowska-Lech Danuta23ORCID,Miller Tymoteusz12ORCID

Affiliation:

1. Institute of Marine and Environmental Sciences, University of Szczecin, Wąska 13, 71-415 Szczecin, Poland

2. Polish Society of Bioinformatics and Data Science BIODATA, Popiełuszki 4c, 71-214 Szczecin, Poland

3. Department of Physiology and Biochemistry, Institute of Biology, University of Szczecin, Felczaka 3c, 71-412 Szczecin, Poland

Abstract

The study of plant metabolism is one of the most complex tasks, mainly due to the huge amount and structural diversity of metabolites, as well as the fact that they react to changes in the environment and ultimately influence each other. Metabolic profiling is most often carried out using tools that include mass spectrometry (MS), which is one of the most powerful analytical methods. All this means that even when analyzing a single sample, we can obtain thousands of data. Data science has the potential to revolutionize our understanding of plant metabolism. This review demonstrates that machine learning, network analysis, and statistical modeling are some techniques being used to analyze large quantities of complex data that provide insights into plant development, growth, and how they interact with their environment. These findings could be key to improving crop yields, developing new forms of plant biotechnology, and understanding the relationship between plants and microbes. It is also necessary to consider the constraints that come with data science such as quality and availability of data, model complexity, and the need for deep knowledge of the subject in order to achieve reliable outcomes.

Funder

Polish Society of Bioinformatics

Data Science BIODATA

Publisher

MDPI AG

Subject

Molecular Biology,Biochemistry,Endocrinology, Diabetes and Metabolism

Reference171 articles.

1. Crozier, A., Clifford, M.N., and Ashihara, H. (2008). Plant Secoundary Metabolites: Occurence, Strucure and Role in the Human Diet, John Wiley & Sons.

2. Modulating Plant Growth–Metabolism Coordination for Sustainable Agriculture;Li;Nature,2018

3. Taiz, L., Zeiger, E., Møller, I., and Murphy, A. (2015). Plant Physiology and Development, Sinauer Associates Incorporated.

4. Natural Diversity and Adaptation in Plant Secondary Metabolism;Kroymann;Curr. Opin. Plant Biol.,2011

5. Focus Issue on Metabolism: Metabolites, Metabolites Everywhere;Fernie;Plant Physiol.,2015

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