Pending Reorganization of Hantaviridae to Include Only Completely Sequenced Viruses: A Call to Action

Author:

Kuhn Jens H.1ORCID,Bradfute Steven B.2ORCID,Calisher Charles H.3,Klempa Boris4ORCID,Klingström Jonas5ORCID,Laenen Lies67ORCID,Palacios Gustavo89ORCID,Schmaljohn Connie S.1,Tischler Nicole D.1011ORCID,Maes Piet6

Affiliation:

1. Integrated Research Facility at Fort Detrick, Division of Clinical Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, MD 21702, USA

2. Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, NM 87131, USA

3. Colorado State University, Fort Collins, CO 80523, USA

4. Institute of Virology, Biomedical Research Center, Slovak Academy of Sciences, 84505 Bratislava, Slovakia

5. Division of Molecular Medicine and Virology, Department of Biomedical and Clinical Sciences, Linköping University, 581 83 Linköping, Sweden

6. Zoonotic Infectious Diseases Unit, KU Leuven, Rega Institute, 3000 Leuven, Belgium

7. Belgium Department of Laboratory Medicine, University Hospitals Leuven, 3000 Leuven, Belgium

8. Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA

9. Global Health Emerging Pathogen Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA

10. Laboratorio de Virología Molecular, Centro Ciencia & Vida, Fundación Ciencia & Vida, Santiago 8581151, Chile

11. Facultad de Medicina y Ciencia, Universidad San Sebastián, Santiago 7510157, Chile

Abstract

The official classification of newly discovered or long-known unassigned viruses by the International Committee on Taxonomy of Viruses (ICTV) requires the deposition of coding-complete or -near-complete virus genome sequences in GenBank to fulfill a requirement of the taxonomic proposal (TaxoProp) process. However, this requirement is fairly new; thus, genomic sequence information is fragmented or absent for many already-classified viruses. As a result, taxon-wide modern phylogenetic analyses are often challenging, if not impossible. This problem is particularly eminent among viruses with segmented genomes, such as bunyavirals, which were frequently classified solely based on single-segment sequence information. To solve this issue for one bunyaviral family, Hantaviridae, we call on the community to provide additional sequence information for incompletely sequenced classified viruses by mid-June 2023. Such sequence information may be sufficient to prevent their possible declassification during the ongoing efforts to establish a coherent, consistent, and evolution-based hantavirid taxonomy.

Funder

Laulima Government Solutions, LLC

Publisher

MDPI AG

Subject

Virology,Infectious Diseases

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