Alternative Splicing Changes Promoted by NOVA2 Upregulation in Endothelial Cells and Relevance for Gastric Cancer

Author:

Di Matteo Anna1ORCID,Belloni Elisa1,Pradella Davide1ORCID,Chiaravalli Anna Maria2ORCID,Pini Giacomo Maria2,Bugatti Mattia3,Alfieri Roberta1ORCID,Barzan Chiara14ORCID,Franganillo Tena Elena15,Bione Silvia1ORCID,Terenzani Elisa1ORCID,Sessa Fausto26,Wyatt Christopher D. R.7ORCID,Vermi William38ORCID,Ghigna Claudia1ORCID

Affiliation:

1. Istituto di Genetica Molecolare “Luigi Luca Cavalli-Sforza”, Consiglio Nazionale delle Ricerche, 27100 Pavia, Italy

2. Department of Pathology, Ospedale di Circolo, ASST-Sette Laghi, 21100 Varese, Italy

3. Department of Molecular and Translational Medicine, University of Brescia, 25100 Brescia, Italy

4. Istituto Universitario di Studi Superiori (IUSS), Università degli Studi di Pavia, 27100 Pavia, Italy

5. Dipartimento di Biologia e Biotecnologie “Lazzaro Spallanzani”, Università degli Studi di Pavia, 27100 Pavia, Italy

6. Department of Medicine and Surgery, Università degli Studi dell’Insubria, 21100 Varese, Italy

7. Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, 08036 Barcelona, Spain

8. Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110-1010, USA

Abstract

Angiogenesis is crucial for cancer progression. While several anti-angiogenic drugs are in use for cancer treatment, their clinical benefits are unsatisfactory. Thus, a deeper understanding of the mechanisms sustaining cancer vessel growth is fundamental to identify novel biomarkers and therapeutic targets. Alternative splicing (AS) is an essential modifier of human proteome diversity. Nevertheless, AS contribution to tumor vasculature development is poorly known. The Neuro-Oncological Ventral Antigen 2 (NOVA2) is a critical AS regulator of angiogenesis and vascular development. NOVA2 is upregulated in tumor endothelial cells (ECs) of different cancers, thus representing a potential driver of tumor blood vessel aberrancies. Here, we identified novel AS transcripts generated upon NOVA2 upregulation in ECs, suggesting a pervasive role of NOVA2 in vascular biology. In addition, we report that NOVA2 is also upregulated in ECs of gastric cancer (GC), and its expression correlates with poor overall survival of GC patients. Finally, we found that the AS of the Rap Guanine Nucleotide Exchange Factor 6 (RapGEF6), a newly identified NOVA2 target, is altered in GC patients and associated with NOVA2 expression, tumor angiogenesis, and poor patient outcome. Our findings provide a better understanding of GC biology and suggest that AS might be exploited to identify novel biomarkers and therapeutics for anti-angiogenic GC treatments.

Funder

Associazione Italiana per la Ricerca sul Cancro

Fondazione Adriano Buzzati-Traverso

AIRC fellowship for Italy

Fondazione Umberto Veronesi

Publisher

MDPI AG

Subject

Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Spectroscopy,Molecular Biology,General Medicine,Catalysis

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