Treasures of Italian Microbial Culture Collections: An Overview of Preserved Biological Resources, Offered Services and Know-How, and Management

Author:

Moretti Marino1ORCID,Tartaglia Jacopo1,Accotto Gian Paolo2ORCID,Beato Maria Serena3ORCID,Bernini Valentina4ORCID,Bevivino Annamaria5ORCID,Boniotti Maria Beatrice6ORCID,Budroni Marilena7ORCID,Buzzini Pietro8ORCID,Carrara Stefania9ORCID,Cerino Federica10ORCID,Cocuzza Clementina Elvezia11ORCID,Comunian Roberta12ORCID,Cosentino Sofia13ORCID,d‘Acierno Antonio14ORCID,De Dea Paola15ORCID,Garzoli Laura16ORCID,Gullo Maria17ORCID,Lampis Silvia18ORCID,Moretti Antonio19ORCID,Natale Alda20ORCID,Perrone Giancarlo19ORCID,Persiani Anna Maria21ORCID,Perugini Iolanda1ORCID,Pitti Monica22ORCID,Poli Annarita23ORCID,Pollio Antonino24ORCID,Reale Anna14ORCID,Ricciardi Annamaria25ORCID,Sbrana Cristiana26ORCID,Selbmann Laura2728ORCID,Settanni Luca29ORCID,Tosi Solveig3031ORCID,Turchetti Benedetta8ORCID,Visconti Paola32ORCID,Zotti Mirca33ORCID,Varese Giovanna Cristina1ORCID

Affiliation:

1. Department of Life Sciences and System Biology, University of Turin, 10125 Turin, Italy

2. Institute for Sustainable Plant Protection, National Research Council (IPSP-CNR), 10135 Turin, Italy

3. Experimental Zooprophylactic Institute of Umbria and Marche “Togo Rosati” (IZSUM), 06126 Perugia, Italy

4. Department of Food and Drug, University of Parma, 43126 Parma, Italy

5. Department for Sustainability, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), 00196 Rome, Italy

6. Experimental Zooprophylactic Institute of Lombardy and Emilia Romagna “Bruno Ubertini” (IZSLERBU), 25124 Brescia, Italy

7. Department of Agricultural Science, University of Sassari, 07100 Sassari, Italy

8. Department of Agricultural, Food and Environmental Sciences, Industrial Yeasts Collection DBVPG, University of Perugia, 06121 Perugia, Italy

9. INMI Biological Bank, Hospital National Institute of Infectious Diseases “Lazzaro Spallanzani” IRCCS, 00149 Rome, Italy

10. National Institute of Oceanography and Applied Geophysics—OGS, 34010 Trieste, Italy

11. Department of Medicine and Surgery, University of Milano-Bicocca, 20900 Monza, Italy

12. Agris Sardegna Agricultural Research Agency of Sardinia, 07100 Sassari, Italy

13. Department of Medical Sciences and Public Health, University of Cagliari, 09042 Cagliari, Italy

14. Institute of Food Sciences, National Research Council (ISA-CNR), 83100 Avellino, Italy

15. Institute for Agri-Food Quality and Technology, Veneto Region’s Agency for Innovation in the Primary Sector, 36016 Thiene, Italy

16. Water Research Institute, National Research Council (IRSA-CNR), 28831 Verbania, Italy

17. Department of Life Sciences, University of Modena and Reggio Emilia, 42121 Reggio Emilia, Italy

18. Department of Biotechnology, University of Verona, 37134 Verona, Italy

19. Institute of Sciences of Food Production, National Research Council (ISPA-CNR), 70126 Bari, Italy

20. Experimental Zooprophylactic Institute of Venezie (IZSVe), 35020 Padova, Italy

21. Department of Environmental Biology, Sapienza University of Rome, 00185 Rome, Italy

22. Experimental Zooprophylactic Institute of Piedmont, Liguria and Valle d‘Aosta, 10154 Turin, Italy

23. Institute of Biomolecular Chemistry, National Research Council (ICB-CNR), 80078 Pozzuoli, Italy

24. Department of Biology, University of Naples “Federico II”, 80126 Naples, Italy

25. School of Agricultural, Forestry and Food Sciences, University of Basilicata, 85100 Potenza, Italy

26. Institute of Agricultural Biology and Biotechnology, National Research Council (IBBA-CNR), 56124 Pisa, Italy

27. Department of Ecological and Biological Sciences, Tuscia University, 01100 Viterbo, Italy

28. Italian National Antarctic Museum (MNA), Mycological Section, 16121 Genoa, Italy

29. Department of Agricultural, Food and Forest Sciences (SAAF), University of Palermo, 90128 Palermo, Italy

30. Department of Earth and Environmental Sciences, University of Pavia, 27100 Pavia, Italy

31. National Biodiversity Future Centre, 90133 Palermo, Italy

32. Biological Resources Centre, IRCCS San Martino General Hospital, 16132 Genova, Italy

33. Department of Earth, Environmental and Life Sciences (DISTAV), University of Genova, 16132 Genova, Italy

Abstract

Microorganisms, microbiomes, and their products (e.g., enzymes, metabolites, antibiotics, etc.) are key players in the functioning of both natural and anthropized Earth ecosystems; they can be exploited for both research purposes and biotechnological applications, including fighting the big challenges of our era, such as climate change. Culture collections (CCs) and microbial Biological Resource Centres (mBRCs) are repositories of microorganisms that investigate and safeguard biodiversity and facilitate the scientific and industrial communities’ access to microbial strains and related know-how by providing external users with skills and services. Considering this, CCs and mBRCs are pivotal institutions for the valorisation of microorganisms, the safeguarding of life, and the fostering of excellent bioscience. The aim of this review is to present the state-of-the-art of Italian CCs and mBRCs, highlighting strengths, weaknesses, threats, and opportunities. Italy is, indeed, a hotspot of microbial biodiversity with a high rate of endemism and incredible potential, not only for the food and beverage sector (i.e., “Made in Italy” products), where microorganisms can have a beneficial or a spoiling function, but also to guarantee environmental sustainability and foster the bioeconomy through the design of new bioprocesses and products. However, weaknesses, such as the lack of management rules in accordance with international quality standards, are also analysed and ways of overcoming them are discussed. In this context, an overview is given of the Joint Research Unit MIRRI-IT and the European-funded SUS-MIRRI.IT project, which aims to improve the management and sustainability of Italian microbial collections, and serves as a starting point for an innovative revolution in the context of CCs and mBRCs worldwide.

Funder

European Commission—NextGenerationEU

Publisher

MDPI AG

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