Advances of Whole Genome Sequencing in Strawberry with NGS Technologies

Author:

Isobe Sachiko1,Shirasawa Kenta1,Hirakawa Hideki1

Affiliation:

1. Kazusa DNA Research Institute

Publisher

Japanese Society for Horticultural Science

Subject

Horticulture,Plant Science

Reference37 articles.

1. Avni, R., M. Nave, O. Barad, K. Baruch, S. O. Twardziok, H. Gundlach, I. Hale, M. Mascher, M. Spannagl, K. Wiebe, K. W. Jordan, G. Golan, J. Deek, B. Ben-Zvi, G. Ben-Zvi, A. Himmelbach, R. P. MacLachlan, A. G. Sharpe, A. Fritz, R. Ben-David, H. Budak, T. Fahima, A. Korol, J. D. Faris, A. Hernandez, M. A. Mikel, A. A. Levy, B. Steffenson, M. Maccaferri, R. Tuberosa, L. Cattivelli, P. Faccioli, A. Ceriotti, K. Kashkush, M. Pourkheirandish, T. Komatsuda, T. Eilam, H. Sela, A. Sharon, N. Ohad, D. A. Chamovitz, K. F. X. Mayer, N. Stein, G. Ronen, Z. Peleg, C. J. Pozniak, E. D. Akhunov and A. Distelfeld. 2017. Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science 357: 93–97.

2. Bassil, N. V., T. M. Davis, H. Zhang, S. Ficklin, M. Mittmann, T. Webster, L. Mahoney, D. Wood, E. S. Alperin, U. R. Rosyara, H. Koehorst-Vanc Putten, A. Monfort, D. J. Sargent, I. Amaya, B. Denoyes, L. Bianco, T. van Dijk, A. Pirani, A. Iezzoni, D. Main, C. Peace, Y. Yang, V. Whitaker, S. Verma, L. Bellon, F. Brew, R. Herrera and E. van de Weg. 2015. Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa. BMC Genomics 16: 155. DOI: 10.1186/s12864-015-1310-1.

3. Bertioli, D. J., S. B. Cannon, L. Froenicke, G. Huang, A. D. Farmer, E. K. Cannon, X. Liu, D. Gao, J. Clevenger, S. Dash, L. Ren, M. C. Moretzsohn, K. Shirasawa, W. Huang, B. Vidigal, B. Abernathy, Y. Chu, C. E. Niederhuth, P. Umale, A. C. Araujo, A. Kozik, K. D. Kim, M. D. Burow, R. K. Varshney, X. Wang, X. Zhang, N. Barkley, P. M. Guimaraes, S. Isobe, B. Guo, B. Liao, H. T. Stalker, R. J. Schmitz, B. E. Scheffler, S. C. Leal-Bertioli, X. Xun, S. A. Jackson, R. Michelmore and P. Ozias-Akins. 2016. The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nat. Genet. 48: 438–446.

4. Bringhurst, R. S. 1990. Cytogenetics and evolution in American Fragaria. Hort. Sci. 106: 679–683.

5. Cao, Y., S. Fanning, S. Proos, K. Jordan and S. Srikumar. 2017. A review on the applications of next generation sequencing technologies as applied to food-related microbiome studies. Frontiers in Microbiol. 8: 1829. DOI: 10.3389/fmicb.2017.01829.

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