Bayesian Sparse Partial Least Squares

Author:

Vidaurre Diego1,van Gerven Marcel A. J.2,Bielza Concha3,Larrañaga Pedro3,Heskes Tom4

Affiliation:

1. Oxford Centre for Human Brain Activity, University of Oxford, Oxford OX3 7JX, U.K.

2. Radboud University Nijmegen, Donders Institute for Brain, Cognition and Behavior, Nijmegen 6525H, Netherlands

3. Computational Intelligence Group, Universidad Politécnia Madrid, Madrid 28660, Spain

4. Radboud University Nijmegen, Institute for Computing and Information Science, Intelligent Systems, Nijmegen 6525H, Netherlands

Abstract

Partial least squares (PLS) is a class of methods that makes use of a set of latent or unobserved variables to model the relation between (typically) two sets of input and output variables, respectively. Several flavors, depending on how the latent variables or components are computed, have been developed over the last years. In this letter, we propose a Bayesian formulation of PLS along with some extensions. In a nutshell, we provide sparsity at the input space level and an automatic estimation of the optimal number of latent components. We follow the variational approach to infer the parameter distributions. We have successfully tested the proposed methods on a synthetic data benchmark and on electrocorticogram data associated with several motor outputs in monkeys.

Publisher

MIT Press - Journals

Subject

Cognitive Neuroscience,Arts and Humanities (miscellaneous)

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