Dynamic Subset Selection Based on a Fitness Case Topology

Author:

Lasarczyk Christian W.G.1,Dittrich Peter2,Banzhaf Wolfgang3

Affiliation:

1. Department of Computer Science, University Dortmund, Joseph—von—Fraunhofer—Str. 20, 44227 Dortmund, Germany,

2. Jena Centre for Bioinformatics and Friedrich—Schiller—University Jena, Department of Mathematics and Computer Science, Bio Systems Analysis Group, 07743 Jena, Germany,

3. Department of Computer Science, Memorial University of Newfoundland, St. John's, NL, A1B 3X5, Canada,

Abstract

A large training set of fitness cases can critically slow down genetic programming, if no appropriate subset selection method is applied. Such a method allows an individual to be evaluated on a smaller subset of fitness cases. In this paper we suggest a new subset selection method that takes the problem structure into account, while being problem independent at the same time. In order to achieve this, information about the problem structure is acquired during evolutionary search by creating a topology (relationship) on the set of fitness cases. The topology is induced by individuals of the evolving population. This is done by increasing the strength of the relation between two fitness cases, if an individual of the population is able to solve both of them. Our new topology—based subset selection method chooses a subset, such that fitness cases in this subset are as distantly related as is possible with respect to the induced topology. We compare topology—based selection of fitness cases with dynamic subset selection and stochastic subset sampling on four different problems. On average, runs with topology—based selection show faster progress than the others.

Publisher

MIT Press - Journals

Subject

Computational Mathematics

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