Synthetic ablations in the C. elegans nervous system

Author:

Towlson Emma K.12,Barabási Albert-László134

Affiliation:

1. Network Science Institute and Department of Physics, Northeastern University, Boston, MA, USA

2. Media Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA

3. Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA, USA

4. Department of Network and Data Science, Central European University, Budapest, Hungary

Abstract

Synthetic lethality, the finding that the simultaneous knockout of two or more individually nonessential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic applications. Yet the concept lacks its parallel in neuroscience—a systematic knowledge base on the role of double or higher order ablations in the functioning of a neural system. Here, we use the framework of network control to systematically predict the effects of ablating neuron pairs and triplets on the gentle touch response. We find that surprisingly small sets of 58 pairs and 46 triplets can reduce muscle controllability in this context, and that these sets are localized in the nervous system in distinct groups. Further, they lead to highly specific experimentally testable predictions about mechanisms of loss of control, and which muscle cells are expected to experience this loss.

Funder

National Science Foundation

Horizon 2020 Framework Programme

European Research Council

Publisher

MIT Press - Journals

Subject

Applied Mathematics,Artificial Intelligence,Computer Science Applications,General Neuroscience

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