The catalytic domains of all human KDM5 JmjC demethylases catalyse N‐methyl arginine demethylation

Author:

Bonnici Joanna12ORCID,Oueini Razanne1,Salah Eidarus1,Johansson Catrine13,Schofield Christopher J.1,Kawamura Akane12ORCID

Affiliation:

1. Chemistry Research Laboratory, Department of Chemistry and the Ineos Oxford Institute for Antimicrobial Research University of Oxford UK

2. Chemistry – School of Natural and Environmental Sciences Newcastle University UK

3. Botnar Research Centre, NIHR Oxford Biomedical Research Unit University of Oxford UK

Abstract

The demethylation of Nε‐methyllysine residues on histones by Jumonji‐C lysine demethylases (JmjC‐KDMs) has been established. A subset of JmjC‐KDMs has also been reported to have Nω‐methylarginine residue demethylase (RDM) activity. Here, we describe biochemical screening studies, showing that the catalytic domains of all human KDM5s (KDM5A‐KDM5D), KDM4E and, to a lesser extent, KDM4A/D, have both KDM and RDM activities with histone peptides. Ras GTPase‐activating protein‐binding protein 1 peptides were shown to be RDM substrates for KDM5C/D. No RDM activity was observed with KDM1A and the other JmjC‐KDMs tested. The results highlight the potential of JmjC‐KDMs to catalyse reactions other than Nε‐methyllysine demethylation. Although our study is limited to peptide fragments, the results should help guide biological studies investigating JmjC functions.

Funder

Cancer Research UK

Engineering and Physical Sciences Research Council

H2020 European Research Council

Royal Society

Wellcome Trust

Publisher

Wiley

Subject

Cell Biology,Genetics,Molecular Biology,Biochemistry,Structural Biology,Biophysics

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