Point‐of‐care detection of fibrosis in liver transplant surgery using near‐infrared spectroscopy and machine learning

Author:

Sharma Varun J.12ORCID,Adegoke John A.3,Fasulakis Michael4,Green Alexander3ORCID,Goh Su K.15,Peng Xiuwen4,Liu Yifan4,Jackett Louise6,Vago Angela15,Poon Eric K. W.7,Starkey Graham15,Moshfegh Sarina1,Muthya Ankita1,D'Costa Rohit89,James Fiona10,Gordon Claire L.710,Jones Robert15,Afara Isaac O.1112,Wood Bayden R.3,Raman Jaishankar12

Affiliation:

1. Department of Surgery, Melbourne Medical School University of Melbourne Melbourne Victoria Australia

2. Brian F. Buxton Department of Cardiac and Thoracic Aortic Surgery Austin Hospital Melbourne Victoria Australia

3. Centre for Biospectroscopy Monash University Melbourne Victoria Australia

4. Department of Engineering University of Melbourne Melbourne Victoria Australia

5. Liver & Intestinal Transplant Unit Austin Health Melbourne Victoria Australia

6. Department of Anatomical Pathology Austin Health Melbourne Victoria Australia

7. Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity University of Melbourne Melbourne Victoria Australia

8. DonateLife Victoria Carlton Victoria Australia

9. Department of Intensive Care Medicine Melbourne Health Melbourne Victoria Australia

10. Department of Infectious Diseases Austin Health Melbourne Victoria Australia

11. School of Information Technology and Electrical Engineering Faculty of Engineering, Architecture, and Information Technology Brisbane Queensland Australia

12. Biomedical Spectroscopy Laboratory, Department of Applied Physics University of Eastern Finland Kuopio Finland

Abstract

AbstractIntroductionVisual assessment and imaging of the donor liver are inaccurate in predicting fibrosis and remain surrogates for histopathology. We demonstrate that 3‐s scans using a handheld near‐infrared‐spectroscopy (NIRS) instrument can identify and quantify fibrosis in fresh human liver samples.MethodsWe undertook NIRS scans on 107 samples from 27 patients, 88 from 23 patients with liver disease, and 19 from four organ donors.ResultsLiver disease patients had a median immature fibrosis of 40% (interquartile range [IQR] 20–60) and mature fibrosis of 30% (10%–50%) on histopathology. The organ donor livers had a median fibrosis (both mature and immature) of 10% (IQR 5%–15%). Using machine learning, this study detected presence of cirrhosis and METAVIR grade of fibrosis with a classification accuracy of 96.3% and 97.2%, precision of 96.3% and 97.0%, recall of 96.3% and 97.2%, specificity of 95.4% and 98.0% and area under receiver operator curve of 0.977 and 0.999, respectively. Using partial‐least square regression machine learning, this study predicted the percentage of both immature (R2 = 0.842) and mature (R2 = 0.837) with a low margin of error (root mean square of error of 9.76% and 7.96%, respectively).ConclusionThis study demonstrates that a point‐of‐care NIRS instrument can accurately detect, quantify and classify liver fibrosis using machine learning.

Publisher

Wiley

Subject

General Medicine

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