Estimation of DNA contamination and its sources in genotyped samples-Reference-Cited by-同舟云学术

Estimation of DNA contamination and its sources in genotyped samples

Published:2019-08-26 Issue:8 Volume:43 Page:980-995
ISSN:0741-0395
Container-title:Genetic Epidemiology
language:en
Short-container-title:Genet. Epidemiol

Author:

Zajac Gregory J. M.¹^ORCID,Fritsche Lars G.¹^ORCID,Weinstock Joshua S.¹^ORCID,Dagenais Susan L.²,Lyons Robert H.²,Brummett Chad M.³^ORCID,Abecasis Gonçalo R.¹^ORCID

Affiliation:

1. Department of Biostatistics, Center for Statistical GeneticsUniversity of Michigan School of Public Health Ann Arbor Michigan

2. Department of Biological Chemistry and DNA Sequencing CoreUniversity of Michigan Ann Arbor Michigan

3. Department of Anesthesiology, Division of Pain MedicineUniversity of Michigan Medical School Ann Arbor Michigan

Funder

National Human Genome Research Institute

Publisher

Wiley

Subject

Genetics(clinical),Epidemiology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/gepi.22257

Reference27 articles.

1. Second-generation PLINK: rising to the challenge of larger and richer datasets

2. ContEst: estimating cross-contamination of human samples in next-generation sequencing data

3. Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms

4. Correcting for Sample Contamination in Genotype Calling of DNA Sequence Data

5. Association of Polygenic Risk Scores for Multiple Cancers in a Phenome-wide Study: Results from The Michigan Genomics Initiative

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