Using KBase to Assemble and Annotate Prokaryotic Genomes-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Using KBase to Assemble and Annotate Prokaryotic Genomes

Published:2017-08 Issue:1 Volume:46 Page:
ISSN:1934-8525
Container-title:Current Protocols in Microbiology
language:en
Short-container-title:Current Protocols in Microbiology

Author:

Allen Benjamin¹,Drake Meghan¹,Harris Nomi²,Sullivan Tarah³

Affiliation:

1. Bioinformatics Group, Oak Ridge National Laboratory Oak Ridge Tennessee

2. Environmental Genomics & Systems Biology Group, Lawrence Berkeley National Laboratory Berkeley California

3. Department of Crop and Soil Sciences, Washington State University Pullman Washington

Publisher

Wiley

Subject

Virology,General Medicine,Microbiology,Parasitology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/cpmc.37

Reference10 articles.

1. The DOE systems biology knowledgebase (KBase);Arkin A. P.;bioRxiv,2016

2. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

3. QUAST: quality assessment tool for genome assemblies

4. Prodigal: prokaryotic gene recognition and translation initiation site identification

5. The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

Cited by 22 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Draft genome sequence of Staphylococcus auricularis PAPLE_T1 isolate of Carica papaya revealing biosynthetic clusters for beneficial metabolites;Microbiology Resource Announcements;2024-04-11

2. Characterizing the microbial metagenome of calcareous stromatolite formations in the San Felipe Creek in the Anza Borrego Desert;Microbiology Resource Announcements;2024-04-11

3. Water Level Fluctuations Modulate the Microbiomes Involved in Biogeochemical Cycling in Floodplains;Microbial Ecology;2023-12-30

4. Five draft genome assemblies from Bacillaceae isolated from a degraded wetland environment;Microbiology Resource Announcements;2023-12-22

5. Investigation of Spotty Liver Disease and Campylobacter hepaticus in Layer Flocks—A Field Study;Avian Diseases;2023-06-05

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3