Interactive and Reproducible Workflows for Exploring and Modeling RNA‐seq Data with pcaExplorer, Ideal, and GeneTonic-Reference-Cited by-同舟云学术

Interactive and Reproducible Workflows for Exploring and Modeling RNA‐seq Data with pcaExplorer, Ideal, and GeneTonic

Published:2022-04 Issue:4 Volume:2 Page:
ISSN:2691-1299
Container-title:Current Protocols
language:en
Short-container-title:Current Protocols

Author:

Ludt Annekathrin¹,Ustjanzew Arsenij¹,Binder Harald²,Strauch Konstantin¹,Marini Federico¹³

Affiliation:

1. Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Division Statistical Genomics and Bioinformatics University Medical Center of the Johannes Gutenberg University Mainz Mainz Germany

2. Institute of Medical Biometry and Statistics (IMBI), Faculty of Medicine and Medical Center University of Freiburg Freiburg im Breisgau Germany

3. Center for Thrombosis and Hemostasis Mainz (CTH) University Medical Center of the Johannes Gutenberg University Mainz Mainz Germany

Publisher

Wiley

Subject

Medical Laboratory Technology,Health Informatics,General Pharmacology, Toxicology and Pharmaceutics,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Neuroscience

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/cpz1.411

Reference63 articles.

1. Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data

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4. Orchestrating single-cell analysis with Bioconductor

5. Count-based differential expression analysis of RNA sequencing data using R and Bioconductor

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