SDA 7: A modular and parallel implementation of the simulation of diffusional association software-Reference-Cited by-同舟云学术

SDA 7: A modular and parallel implementation of the simulation of diffusional association software

Published:2015-06-29 Issue:21 Volume:36 Page:1631-1645
ISSN:0192-8651
Container-title:Journal of Computational Chemistry
language:en
Short-container-title:J. Comput. Chem.

Author:

Martinez Michael¹,Bruce Neil J.¹,Romanowska Julia¹,Kokh Daria B.¹,Ozboyaci Musa¹²,Yu Xiaofeng¹³,Öztürk Mehmet Ali¹³,Richter Stefan¹,Wade Rebecca C.¹⁴⁵

Affiliation:

1. Molecular and Cellular Modeling Group, Heidelberg Institute for Theoretical Studies (HITS)Schloss‐Wolfsbrunnenweg 3569118Heidelberg Germany

2. Heidelberg Graduate School of Mathematical and Computational Methods for the Sciences (HGS MathComp)Im Neuenheimer Feld 36869120Heidelberg Germany

3. Hartmut Hoffmann‐Berling International Graduate School of Molecular and Cellular Biology (HBIGS)Im Neuenheimer Feld 50169120Heidelberg Germany

4. Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH), DKFZ‐ZMBH AllianceIm Neuenheimer Feld 28269120Heidelberg Germany

5. Interdisciplinary Center for Scientific Computing (IWR), Heidelberg UniversityIm Neuenheimer Feld 36869120Heidelberg Germany

Funder

Bundesministerium für Bildung und Forschung

Seventh Framework Programme

European Molecular Biology Organization

Innovative Medicines Initative Joint Undertaking

Klaus Tschira Foundation (KTS)

Publisher

Wiley

Subject

Computational Mathematics,General Chemistry

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/jcc.23971

Reference43 articles.

1. Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian dynamics program

2. Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian Dynamics program

3. Browndye: A software package for Brownian dynamics

4. Coarse grained simulations of a small peptide: Effects of finite damping and hydrodynamic interactions

5. Electrostatic effects in the Brownian dynamics of association and orientation of heme proteins

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