Building use‐inspired species distribution models: Using multiple data types to examine and improve model performance

Author:

Braun Camrin D.1,Arostegui Martin C.1,Farchadi Nima2,Alexander Michael3,Afonso Pedro14,Allyn Andrew5,Bograd Steven J.6,Brodie Stephanie67,Crear Daniel P.8,Culhane Emmett F.19,Curtis Tobey H.10,Hazen Elliott L.67ORCID,Kerney Alex5,Lezama‐Ochoa Nerea67ORCID,Mills Katherine E.5,Pugh Dylan5,Queiroz Nuno1112,Scott James D.313,Skomal Gregory B.14,Sims David W.1215,Thorrold Simon R.1,Welch Heather67ORCID,Young‐Morse Riley5,Lewison Rebecca L.2

Affiliation:

1. Biology Department Woods Hole Oceanographic Institution Woods Hole Massachusetts USA

2. Institute for Ecological Monitoring and Management, San Diego State University San Diego California USA

3. NOAA Earth System Research Laboratory Boulder Colorado USA

4. Okeanos and Institute of Marine Research University of the Azores Horta Portugal

5. Gulf of Maine Research Institute Portland Maine USA

6. Environmental Research Division, Southwest Fisheries Science Center, National Oceanic and Atmospheric Administration Monterey California USA

7. Institute of Marine Sciences, University of California Santa Cruz California USA

8. ECS Federal, in Support of National Marine Fisheries Service, Atlantic Highly Migratory Species Management Division Silver Spring Maryland USA

9. Massachusetts Institute of Technology–Woods Hole Oceanographic Institution Joint Program in Oceanography‐Applied Ocean Science and Engineering Cambridge Massachusetts USA

10. National Marine Fisheries Service, Atlantic Highly Migratory Species Management Division Gloucester Massachusetts USA

11. Research Network in Biodiversity and Evolutionary Biology Universidade do Porto Vairão Portugal

12. Marine Biological Association of the United Kingdom, The Laboratory Plymouth UK

13. Cooperative Institute for Research in Environmental Sciences University of Colorado Boulder Boulder Colorado USA

14. Massachusetts Division of Marine Fisheries New Bedford Massachusetts USA

15. Ocean and Earth Science, National Oceanography Centre Southampton University of Southampton Southampton UK

Abstract

AbstractSpecies distribution models (SDMs) are becoming an important tool for marine conservation and management. Yet while there is an increasing diversity and volume of marine biodiversity data for training SDMs, little practical guidance is available on how to leverage distinct data types to build robust models. We explored the effect of different data types on the fit, performance and predictive ability of SDMs by comparing models trained with four data types for a heavily exploited pelagic fish, the blue shark (Prionace glauca), in the Northwest Atlantic: two fishery dependent (conventional mark‐recapture tags, fisheries observer records) and two fishery independent (satellite‐linked electronic tags, pop‐up archival tags). We found that all four data types can result in robust models, but differences among spatial predictions highlighted the need to consider ecological realism in model selection and interpretation regardless of data type. Differences among models were primarily attributed to biases in how each data type, and the associated representation of absences, sampled the environment and summarized the resulting species distributions. Outputs from model ensembles and a model trained on all pooled data both proved effective for combining inferences across data types and provided more ecologically realistic predictions than individual models. Our results provide valuable guidance for practitioners developing SDMs. With increasing access to diverse data sources, future work should further develop truly integrative modeling approaches that can explicitly leverage the strengths of individual data types while statistically accounting for limitations, such as sampling biases.

Funder

National Aeronautics and Space Administration

Publisher

Wiley

Subject

Ecology

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