Biomedical Question Answering: A Survey of Approaches and Challenges

Author:

Jin Qiao1ORCID,Yuan Zheng1,Xiong Guangzhi1,Yu Qianlan1,Ying Huaiyuan1,Tan Chuanqi2,Chen Mosha2,Huang Songfang2,Liu Xiaozhong3,Yu Sheng1

Affiliation:

1. Tsinghua University, China

2. Alibaba Group, China

3. Indiana University Bloomington, USA

Abstract

Automatic Question Answering (QA) has been successfully applied in various domains such as search engines and chatbots. Biomedical QA (BQA), as an emerging QA task, enables innovative applications to effectively perceive, access, and understand complex biomedical knowledge. There have been tremendous developments of BQA in the past two decades, which we classify into five distinctive approaches: classic, information retrieval, machine reading comprehension, knowledge base, and question entailment approaches. In this survey, we introduce available datasets and representative methods of each BQA approach in detail. Despite the developments, BQA systems are still immature and rarely used in real-life settings. We identify and characterize several key challenges in BQA that might lead to this issue, and we discuss some potential future directions to explore.

Publisher

Association for Computing Machinery (ACM)

Subject

General Computer Science,Theoretical Computer Science

Reference241 articles.

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2. Asma Ben Abacha and Dina Demner-Fushman. 2016. Recognizing question entailment for medical question answering. In AMIA Annual Symposium Proceedings, Vol. 2016. American Medical Informatics Association.

3. A question-entailment approach to question answering

4. Asma Ben Abacha Sadid A. Hasan Vivek V. Datla Joey Liu Dina Demner-Fushman and Henning Müller. 2019. VQA-Med: Overview of the medical visual question answering task at ImageCLEF 2019. In CLEF 2019 Working Notes .

5. Medical question answering

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