Enhanced transformation efficiency in Treponema denticola enabled by SyngenicDNA‐based plasmids lacking restriction–modification target motifs

Author:

Johnston Christopher D.1ORCID,Goetting‐Minesky M. Paula2,Kennedy Kelly1,Godovikova Valentina2,Zayed Sara M.23,Roberts Richard J.4,Fenno J. Christopher2

Affiliation:

1. Vaccine and Infection Disease Division Fred Hutchinson Cancer Research Center Seattle Washington USA

2. Department of Biologic and Materials Sciences and Prosthodontics, School of Dentistry University of Michigan Ann Arbor Michigan USA

3. Faculty of Dentistry Alexandria University Alexandria Egypt

4. New England Biolabs Ipswich Massachusetts USA

Abstract

AbstractOral spirochetes are among a small group of keystone pathogens contributing to dysregulation of tissue homeostatic processes that leads to breakdown of the tissue and bone supporting the teeth in periodontal disease. Additionally, our group has recently demonstrated that Treponema are among the dominant microbial genera detected intracellularly in tumor specimens from patients with oral squamous cell carcinoma. While over 60 species and phylotypes of oral Treponema have been detected, T. denticola is one of the few that can be grown in culture and the only one in which genetic manipulation is regularly performed. Thus, T. denticola is a key model organism for studying spirochete metabolic processes, interactions with other microbes, and host cell and tissue responses relevant to oral diseases, as well as venereal and nonvenereal treponematoses whose agents lack workable genetic systems. We previously demonstrated improved transformation efficiency using an Escherichia coliT. denticola shuttle plasmid and its utility for expression in T. denticola of an exogenous fluorescent protein that is active under anaerobic conditions. Here, we expand on this work by characterizing T. denticola Type I and Type II restriction–modification (R–M) systems and designing a high‐efficiency R–M‐silent “SyngenicDNA” shuttle plasmid resistant to all T. denticola ATCC 35405 R–M systems. Resequencing of the ATCC 33520 genome revealed an additional Type I R–M system consistent with the relatively low transformation efficiency of the shuttle plasmid in this strain. Using SyngenicDNA approaches, we optimized shuttle plasmid transformation efficiency in T. denticola and used it to complement a defined T. denticola ΔfhbB mutant strain. We further report the first high‐efficiency transposon mutagenesis of T. denticola using an R–M‐silent, codon‐optimized, himarC9 transposase‐based plasmid. Thus, use of SyngenicDNA‐based strategies and tools can enable further mechanistic examinations of T. denticola physiology and behavior.

Publisher

Wiley

Subject

Microbiology (medical),General Dentistry,Immunology,Microbiology

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