Visual Analysis of Biomolecular Cavities: State of the Art-Reference-Cited by-同舟云学术

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Visual Analysis of Biomolecular Cavities: State of the Art

Published:2016-06 Issue:3 Volume:35 Page:527-551
ISSN:0167-7055
Container-title:Computer Graphics Forum
language:en
Short-container-title:Computer Graphics Forum

Author:

Krone M.¹,Kozlíková B.²,Lindow N.³,Baaden M.⁴,Baum D.³,Parulek J.⁵,Hege H.-C.³,Viola I.⁵⁶

Affiliation:

1. Visualization Research Center; University of Stuttgart; Germany

2. Faculty of Informatics; Masaryk University; Czech Republic

3. Department of Visual Data Analysis; Zuse Institute Berlin; Germany

4. Laboratoire de Biochimie Théorique; UPR 9080 CNRS France

5. Department of Informatics; University of Bergen; Norway

6. Institute of Computer Graphics and Algorithms; TU Wien Austria

Publisher

Wiley

Subject

Computer Graphics and Computer-Aided Design

Reference136 articles.

1. Pocketome via comprehensive identification and classification of ligand binding envelopes;An;Mol. Cell. Proteomics,2005

2. Software tools for identification, visualization and analysis of protein tunnels and channels;Brezovský;Biotechnol.Adv.,2013

3. MOLEonline 2.0: interactive web-based analysis of biomacromolecular channels;Berka;Nucleic Acids Res.,2012

4. MoleCollar and Tunnel Heat Map Visualizations for Conveying spatio-Temporo-Chemical Properties Across and Along Protein Voids;Byška;Comput. Graph. Forum,2015

5. Fast prediction and visualization of protein binding pockets with PASS;Brady;J. Comput. Aided Mol. Des.,2000

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1. Reinforcing Tunnel Network Exploration in Proteins Using Gaussian Accelerated Molecular Dynamics;Journal of Chemical Information and Modeling;2024-08-15

2. CageCavityCalc (C3): A Computational Tool for Calculating and Visualizing Cavities in Molecular Cages;Journal of Chemical Information and Modeling;2024-07-09

3. Enhancing molecular visualization: Perceptual evaluation of line variables with application to uncertainty visualization;Computers & Graphics;2023-08

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5. State of the Art of Molecular Visualization in Immersive Virtual Environments;Computer Graphics Forum;2023-02-24

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