Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River-Reference-Cited by-同舟云学术

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Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River

Published:2013-08-28 Issue:5 Volume:115 Page:1147-1158
ISSN:1364-5072
Container-title:Journal of Applied Microbiology
language:en
Short-container-title:J Appl Microbiol

Author:

Staley C.¹,Unno T.¹,Gould T.J.¹²,Jarvis B.¹²,Phillips J.²,Cotner J.B.³,Sadowsky M.J.¹⁴

Affiliation:

1. BioTechnology Institute; University of Minnesota; St. Paul MN USA

2. Biology Program; University of Minnesota; Minneapolis MN USA

3. Department of Ecology, Evolution and Behavior; University of Minnesota; Saint Paul MN USA

4. Department of Soil, Water and Climate; University of Minnesota; St. Paul MN USA

Funder

American Recovery and Reinvestment Act of 2009

Minnesota Environment and Natural Resources Trust Fund

Legislative-Citizen Commission on Minnesota Resources

Publisher

Wiley

Subject

Applied Microbiology and Biotechnology,General Medicine,Biotechnology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/jam.12323/fullpdf

Reference50 articles.

1. Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads;Bartram;Appl Environ Microbiol,2011

2. An ordination of the upland forest communities of southern Wisconsin;Bray;Ecol Monogr,1957

3. Microbial community structure in the North Pacific Ocean;Brown;ISME J,2009

4. Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions;Claesson;Nucleic Acids Res,2010

5. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis;Cole;Nucleic Acids Res,2009

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