MicNeSs: genotyping microsatellite loci from a collection of (NGS) reads

Author:

Suez Marie123,Behdenna Abdelkader1234,Brouillet Sophie123,Graça Paula12,Higuet Dominique12,Achaz Guillaume1234

Affiliation:

1. UPMC Univ Paris 06; Institut de Biologie Paris-Seine; Evolution Paris-Seine (UMR 7138); Team ‘Eucaryotic Genome Evolution’ Université Pierre et Marie Curie; Sorbonne Universités; Bat A Et 4 7 quai St Bernard F-75005 Paris France

2. CNRS; Institut de Biologie Paris-Seine; Evolution Paris-Seine (UMR 7138); Team ‘Eucaryotic Genome Evolution’; F-75005 Paris France

3. Atelier de BioInformatique; Université Pierre et Marie Curie; 4, Place Jussieu F-75005 Paris France

4. SMILE; CIRB (UMR 7241); Collège de France; 11, Place Marcelin Berthelot Paris Cedex 05 75231 Paris France

Funder

Cofiroute and the Parc Naturel Regional de la Haute Vallée de Chevreuse

Agence Nationale de la Recherche

Publisher

Wiley

Subject

Genetics,Ecology, Evolution, Behavior and Systematics,Biotechnology

Reference34 articles.

1. Microsatellite data show recent demographic expansions in sedentary but not in nomadic human populations in Africa and Eurasia;Aimé;European Journal of Human Genetics: EJHG,2014

2. Dindel: Accurate indel calls from short-read data;Albers;Genome Research,2011

3. Optimality proof for the symetric fibonacci search technique;Avriel;The Fibonacci Quarterly,1966

4. The Skew-normal distribution and related multivariate fami-lies*;Azzalini;Scandinavian Journal of Statistics,2005

5. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data;Cornuet;Genetics,1996

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