PrimerMiner : an r package for development and in silico validation of DNA metabarcoding primers-Reference-Cited by-同舟云学术

PrimerMiner : an r package for development and in silico validation of DNA metabarcoding primers

Published:2016-11-10 Issue:5 Volume:8 Page:622-626
ISSN:2041-210X
Container-title:Methods in Ecology and Evolution
language:en
Short-container-title:Methods Ecol Evol

Author:

Elbrecht Vasco¹^ORCID,Leese Florian¹²

Affiliation:

1. Aquatic Ecosystem Research Faculty of Biology University of Duisburg‐Essen Universitätsstraße 5 Essen 45141 Germany

2. Centre for Water and Environmental Research (ZWU) Essen University of Duisburg‐Essen Universitätsstraße 2 Essen 45141 Germany

Funder

Kurt-Eberhard-Bode-Stiftung für Medizinische und Naturwissenschaftliche Forschung

Publisher

Wiley

Subject

Ecological Modelling,Ecology, Evolution, Behavior and Systematics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/2041-210X.12687

Reference20 articles.

1. DNA metabarcoding of insects and allies: an evaluation of primers and pipelines

2. DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

3. UPARSE: highly accurate OTU sequences from microbial amplicon reads

4. Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol

5. Data from: PrimerMiner: an r package for development and in silico validation of DNA metabarcoding primers;Elbrecht V.;Dryad Digital Repository,2016

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