PrimerMiner : an r package for development and in silico validation of DNA metabarcoding primers
Author:
Affiliation:
1. Aquatic Ecosystem Research Faculty of Biology University of Duisburg‐Essen Universitätsstraße 5 Essen 45141 Germany
2. Centre for Water and Environmental Research (ZWU) Essen University of Duisburg‐Essen Universitätsstraße 2 Essen 45141 Germany
Funder
Kurt-Eberhard-Bode-Stiftung für Medizinische und Naturwissenschaftliche Forschung
Publisher
Wiley
Subject
Ecological Modelling,Ecology, Evolution, Behavior and Systematics
Link
https://onlinelibrary.wiley.com/doi/pdf/10.1111/2041-210X.12687
Reference20 articles.
1. DNA metabarcoding of insects and allies: an evaluation of primers and pipelines
2. DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match
3. UPARSE: highly accurate OTU sequences from microbial amplicon reads
4. Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol
5. Data from: PrimerMiner: an r package for development and in silico validation of DNA metabarcoding primers;Elbrecht V.;Dryad Digital Repository,2016
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