A cost‐effective tsCUT&Tag method for profiling transcription factor binding landscape-Reference-Cited by-同舟云学术

A cost‐effective tsCUT&Tag method for profiling transcription factor binding landscape

Published:2022-10-04 Issue:11 Volume:64 Page:2033-2038
ISSN:1672-9072
Container-title:Journal of Integrative Plant Biology
language:en
Short-container-title:JIPB

Author:

Wu Leiming¹²,Luo Zi¹,Shi Yanni¹,Jiang Yizhe¹,Li Ruonan¹,Miao Xinxin¹,Yang Fang¹,Li Qing¹,Zhao Han³,Xue Jiquan⁴,Xu Shutu⁴,Zhang Tifu³,Li Lin¹⁵

Affiliation:

1. National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory Huazhong Agricultural University Wuhan 430070 China

2. The National Engineering Laboratory of Crop Resistance Breeding, School of Life Sciences Anhui Agricultural University Hefei 230036 China

3. Jiangsu Provincial Key Laboratory of Agrobiology, Institute of Germplasm Resources and Biotechnology Jiangsu Academy of Agricultural Sciences Nanjing 210014 China

4. The Key Laboratory of Biology and Genetics Improvement of Maize in Arid Area of Northwest Region, Ministry of Agriculture Northwest A&F University Yangling 712100 China

5. Hubei Hongshan Laboratory Wuhan 430070 China

Publisher

Wiley

Subject

Plant Science,General Biochemistry, Genetics and Molecular Biology,Biochemistry

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/jipb.13354

Reference25 articles.

1. Mapping genome-wide transcription-factor binding sites using DAP-seq

2. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

3. DeepGRN: prediction of transcription factor binding site across cell-types using attention-based deep neural networks

4. The evolution of apical dominance in maize

5. The regulatory landscape of a core maize domestication module controlling bud dormancy and growth repression

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