Highly specific <scp>qPCR</scp> and amplicon sequencing method for detection of quarantine citrus pathogen <i>Phyllosticta citricarpa</i> applicable for air samples-Reference-Cited by-同舟云学术

Highly specific qPCR and amplicon sequencing method for detection of quarantine citrus pathogen Phyllosticta citricarpa applicable for air samples

Published:2022-11-29 Issue:3 Volume:72 Page:548-563
ISSN:0032-0862
Container-title:Plant Pathology
language:en
Short-container-title:Plant Pathology

Author:

Zajc Janja¹²^ORCID,Kogej Zwitter Zala¹³^ORCID,Fišer Sara¹,Gostinčar Cene⁴^ORCID,Vicent Antonio⁵^ORCID,Domenech Anaïs Galvañ⁵^ORCID,Riccioni Luca⁶^ORCID,Boonham Neil⁷^ORCID,Ravnikar Maja¹^ORCID,Kogovšek Polona¹^ORCID

Affiliation:

1. Department of Biotechnology and Systems Biology National Institute of Biology Ljubljana Slovenia

2. Agricultural Institute of Slovenia Ljubljana Slovenia

3. Jožef Stefan International Postgraduate School Ljubljana Slovenia

4. Biotechnical Faculty, Department of Biology University of Ljubljana Ljubljana Slovenia

5. Institut Valencià d'Investigacions Agràries (IVIA), Centre de Protecció Vegetal i Biotecnologia Moncada Valencia Spain

6. Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca difesa e certificazione (CREA‐DC) Rome Italy

7. School of Natural and Environmental Sciences Newcastle University Newcastle upon Tyne UK

Funder

European Food Safety Authority

European Social Fund

Javna Agencija za Raziskovalno Dejavnost RS

Publisher

Wiley

Subject

Horticulture,Plant Science,Genetics,Agronomy and Crop Science

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1111/ppa.13679

Reference52 articles.

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3. Regulation (EU) 2019/2072 of 28 November 2019 establishing uniform conditions for the implementation of regulation (EU) 2016/2031 of the European Parliament and the council, as regards protective measures against pests of plants, and repealing commission regulation (EC) No 690/2008 and amending commission implementing regulation (EU) 2018/2019;Anon;Official Journal of the European Union,2019

4. A fungal mock community control for amplicon sequencing experiments

5. DNA metabarcoding uncovers fungal diversity of mixed airborne samples in Italy

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3. Harnessing the power of comparative genomics to support the distinction of sister species within Phyllosticta and development of highly specific detection of Phyllosticta citricarpa causing citrus black spot by real-time PCR;PeerJ;2023-10-23