SWATH Mass Spectrometry Performance Using Extended Peptide MS/MS Assay Libraries

Author:

Wu Jemma X.,Song Xiaomin,Pascovici Dana,Zaw Thiri,Care Natasha,Krisp Christoph,Molloy Mark P.

Funder

BioPlatforms Australia through the Australian Government?s National Collaborative Research Infrastructure Scheme

the Cancer Institute NSW through Research Equipment grants and funding of Sydney Vital translational cancer research centre

Publisher

Elsevier BV

Subject

Molecular Biology,Biochemistry,Analytical Chemistry

Reference38 articles.

1. Accurate peptide fragment mass analysis: multiplexed peptide identification and quantification;Weisbrod;Journal of proteome research,2012

2. “Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis.”;Gillet;Molecular & Cellular Proteomics,2012

3. Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra;Venable;Nat. Methods,2004

4. Absolute quantification of proteins by LCMSE a virtue of parallel MS acquisition;Silva;Mol. Cell. Proteomics,2006

5. Precursor acquisition independent from ion count: how to dive deeper into the proteomics ocean;Panchaud;Anal. Chem,2009

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